Job Description P39383 Confidence 98.99% Date Thu Jan 5 12:00:15 GMT 2012 Rank 65 Aligned Residues 229 % Identity 18% Template c1zxoB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:conserved hypothetical protein q8a1p1; PDBTitle: x-ray crystal structure of protein q8a1p1 from bacteroides2 thetaiotaomicron. northeast structural genomics consortium3 target btr25. Resolution 3.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																																			.	.	.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		S	I	G	I	D	S	G	S	T	A	T	K	G	I	L	L	A	D	G	V	I	T	R	R	F	L	V	P	T	P	F	R	P	A	T	A	I	T	E	A	W	E	T	L	R	E	G	L	E	.	.	.	.	.	.	T	T	P	F	L	T	L	T	G	Y	G	R	Q	L	V	D	F	A	.	.	.	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.																			.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	I	A	D	S	G	S	T	K	T	D	W	C	V	V	L	N	G	A	V	I	K	R	L	G	T	K	G	I	N	P	F	F	Q	S	E	E	E	I	Q	Q	K	L	T	A	S	L	L	P	Q	L	P	E	G	K	F	N	A	V	Y	F	Y	G	A	G	C	T	P	E	K	A	P	V	L	R	R	A	I	A
Template Known Secondary structure									T	T								S	S	S	S												T	T	T	S											T	T	T	G	G	G	S		S	S										T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
										71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	D	K	Q	V	T	E	I	S	C	H	G	L	G	A	R	F	L	A	P	A	T	R	A	V	I	D	I	G	G	Q	D	S	K	V	I	Q	L	D	D	D	G	N	L	C	D	F	L	M	N	D	K	C	A	A	G	T	G	R	F	L	E	V	I	S	R	T	L	G	T	S	V	E
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																	.	.	.																												.	.	.	.	.	.	.
Template Conservation																										.	.	.																												.	.	.	.	.	.	.
Template Sequence		D	S	L	P	V	I	G	N	I	K	A	N	S	D	X	L	A	A	A	H	G	L	C	G	.	.	.	Q	K	A	G	I	A	C	I	L	G	T	G	S	N	S	C	F	Y	N	G	K	E	I	V	S	N	I	.	.	.	.	.	.	.	S	P	L	G	F	I	L	G	D	E	G	S	G	A	V	L	G	K	L
Template Known Secondary structure				S																					T	.	.	.	T	S								S	S	S								S	S	S						.	.	.	.	.	.	.										T	T	S
Template Predicted Secondary structure																										.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.								.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.													.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200							.
Predicted Secondary structure																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		Q	L	D	S	I	T	E	N	V	T	P	H	A	I	T	S	M	C	T	V	F	.	.	.	A	E	S	E	A	I	S	L	R	S	A	G	V	A	P	E	A	I	L	A	.	.	.	.	.	.	.	.	.	.	.	.	G	V	I	N	A	M	A	R	R	S	A	N	F	I	A	R	L	.	.	.	.	.	.	S
Query Conservation																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	G	D	I	L	K	N	Q	L	P	A	T	L	K	E	E	F	L	K	Q	F	D	L	T	P	P	E	I	I	D	R	V	Y	R	Q	P	F	P	N	R	F	L	A	S	L	S	P	F	I	A	Q	H	L	E	E	P	A	I	R	Q	L	V	X	N	S	F	I	A	F	F	R	R	N	V	X	Q	Y	D	Y
Template Known Secondary structure							T	T	T		S													T												T	S	S									T						T	T	T	T	S																		T	G	G	G	S		G
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		202	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		C	E	A	P	I	L	F	T	G	G	V	S	H	.	C	Q	K	F	A	R	M	L	E	S	H	L	R	M	P	V	N	T	H	P	D	A	Q	F	A	G	A	I
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		K	Q	Y	P	V	H	F	I	G	S	I	A	Y	C	Y	K	E	I	L	Q	D	A	A	R	Q	T	G	I	Q	I	G	K	I	L	Q	S	P	X	E	G	L	I
Template Known Secondary structure		G	G	S						S						T											T	T								S		T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions