Return to main results Retrieve Phyre Job Id

Job DescriptionP23840
Confidence9.65%DateThu Jan 5 11:39:46 GMT 2012
Rank22Aligned Residues50
% Identity28%Templated1biaa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Biotin repressor-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.......
Predicted Secondary structure 
















Query SS confidence 
























































Query Sequence  MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTI
Query Conservation        


 

   
 




 



   


  
  
  

 

  

   
  
Alig confidence 

















..














.....
















Template Conservation 

   
   

 

    ..  
  


  
 

 ..... 

 
 
  
   
  
Template Sequence  MKDNTVPLKLIALLANGE. . FHSGEQLGETLGMSR. . . . . AAINKHIQTLRDWGVDV
Template Known Secondary structure 



TTSS..
B
TS
.....TT


Template Predicted Secondary structure 




..





.....


Template SS confidence 
























































   1........10........ .20.........30... ......40.........50
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions