Return to main results Retrieve Phyre Job Id

Job DescriptionP23840
Confidence33.56%DateThu Jan 5 11:39:46 GMT 2012
Rank1Aligned Residues39
% Identity31%Templatec2pmzN_
PDB info PDB header:translation, transferaseChain: N: PDB Molecule:dna-directed rna polymerase subunit n; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80........
Predicted Secondary structure 
















Query SS confidence 






































Query Sequence  CENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYAC
Query Conservation 
   
  
  

         
    
   
  


 

Alig confidence 






































Template Conservation 







    
 
   
       
 

 


 



Template Sequence  CFTCGSLIADKWQSFITRVNAGENPGKVLDDLGVKRYCC
Template Known Secondary structure 
TTT



TTTSS
SSS

SS
Template Predicted Secondary structure 












Template SS confidence 






































   7..10.........20.........30.........40.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions