Return to main results Retrieve Phyre Job Id

Job DescriptionP23840
Confidence10.67%DateThu Jan 5 11:39:46 GMT 2012
Rank20Aligned Residues37
% Identity16%Templatec2dunA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna polymerase mu; PDBTitle: solution structure of brct domain of dna polymerase mu
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50....... ..60.........70.........80........
Predicted Secondary structure 



..












Query SS confidence 










. .






























Query Sequence  KEACENSGHTI. . DDHFEEILDMVKIGSNAKRALKDIVLSRYAC
Query Conservation    

   
  
..  

         
    
   
  


 

Alig confidence 










..



.....





















Template Conservation     
      
  
   ..... 
                 


Template Sequence  LTESLGAGQPVPVECRH. . . . . RLEVAGPRKGPLSPAWMPAYAC
Template Known Secondary structure  TS




TTT.....S



S


S







TT

Template Predicted Secondary structure 









.....













Template SS confidence 











































   8990.........100..... ....110.........120.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions