Return to main results Retrieve Phyre Job Id

Job DescriptionP61714
Confidence71.48%DateThu Jan 5 12:07:24 GMT 2012
Rank43Aligned Residues63
% Identity24%Templated1tjya_
SCOP infoPeriplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like
Resolution1.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.... .....60....... ..70........
Predicted Secondary structure 











.

..



Query SS confidence 












































.












. .










Query Sequence  TPDARVAITIARFNNFINDSLLEGAIDALKRIGQVKDENITVVWV. PGAYELPLAAGAL. . AKTGKYDAVIA
Query Conservation      




 
 

  
   

 

   
   
      
 
  
.


 


 
   
..      



 
Alig confidence 
































......





.












..










Template Conservation 
   

  
     


      
   

   
......  
        
   
   
   
    
 


Template Sequence  GSAERIAFIPKLVGVGFFTSGGNGAQEAGKALG. . . . . . IDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIV
Template Known Secondary structure 




SSSSST......



SS

TT
S
Template Predicted Secondary structure 










......









Template SS confidence 







































































   25....30.........40.........50....... ..60.........70.........80.........90
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions