Phyre 2 alignment of P61714 with c3rotA

Job Description P61714
Confidence 63.19% Date Thu Jan 5 12:07:24 GMT 2012

Rank 57 Aligned Residues 63

% Identity 17% Template c3rotA_

PDB info PDB header:transport protein Chain: A: PDB Molecule:abc sugar transporter, periplasmic sugar binding protein; PDBTitle: crystal structure of abc sugar transporter (periplasmic sugar binding2 protein) from legionella pneumophila

Resolution 1.91 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence	D	A	R	V	A	I	T	I	A	R	F	N	N	F	I	N	D	S	L	L	E	G	A	I	D	A	L	K	R	I	G	Q	V	K	D	E	N	I	T	V	V	W	V	P	G	A	Y	E	L	P	L	A	A	G	A	L	.	.	A	K	T	G	K	Y	D	A	V	I	A
Query Conservation																																																									.	.
Alig confidence																																.	.	.	.																						.	.
Template Conservation																																.	.	.	.
Template Sequence	R	D	K	Y	Y	L	I	T	H	G	S	Q	D	P	Y	W	T	S	L	F	Q	G	A	K	K	A	A	E	E	L	K	.	.	.	.	V	D	L	Q	I	L	A	P	P	G	A	N	D	V	P	K	Q	V	Q	F	I	E	S	A	L	A	T	Y	P	S	G	I	A	T
Template Known Secondary structure									S				S																		T	.	.	.	.									S	S	S																T			S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
	22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

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Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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