Job Description P61714 Confidence 42.24% Date Thu Jan 5 12:07:24 GMT 2012 Rank 81 Aligned Residues 59 % Identity 12% Template c2qvcC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:sugar abc transporter, periplasmic sugar-binding PDBTitle: crystal structure of a periplasmic sugar abc transporter2 from thermotoga maritima Resolution 2.40 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.														.	.
Query SS confidence																																												.														.	.
Query Sequence		A	R	V	A	I	T	I	A	R	F	N	N	F	I	N	D	S	L	L	E	G	A	I	D	A	L	K	R	I	G	Q	V	K	D	E	N	I	T	V	V	W	V	.	P	G	A	Y	E	L	P	L	A	A	G	A	L	.	.	A	K	T	G	K	Y	D	A	V	I	A
Query Conservation																																												.														.	.
Alig confidence									.																							.	.	.	.	.	.							.														.	.
Template Conservation									.																							.	.	.	.	.	.
Template Sequence		L	T	I	G	V	I	G	.	K	S	V	H	P	Y	W	S	Q	V	E	Q	G	V	K	A	A	G	K	A	L	G	.	.	.	.	.	.	V	D	T	K	F	F	V	P	Q	K	E	D	I	N	A	Q	L	Q	X	L	E	S	F	I	A	E	G	V	N	G	I	A	I
Template Known Secondary structure									.	S		S	S																		T	.	.	.	.	.	.									S	S																T	T		S
Template Predicted Secondary structure									.																							.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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