Job Description P61714 Confidence 64.50% Date Thu Jan 5 12:07:24 GMT 2012 Rank 56 Aligned Residues 65 % Identity 18% Template c2fqxA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:membrane lipoprotein tmpc; PDBTitle: pnra from treponema pallidum complexed with guanosine Resolution 1.70 Å

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		11	.	.	.	.	.	.	.	.	20	.			.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure													.	.					.
Query SS confidence													.	.					.
Query Sequence		P	D	A	R	V	A	I	T	I	A	R	.	.	F	N	N	F	.	I	N	D	S	L	L	E	G	A	I	D	A	L	K	R	I	G	Q	V	K	D	E	N	I	T	V	V	W	V	P	G	A	Y	E	L	P	L	A	A	G	A	L	A	K	T	G	K	Y	D	A	V	I	A	L	G
Query Conservation													.	.					.
Alig confidence													.	.					.																		.	.	.	.																										.
Template Conservation																																					.	.	.	.																										.
Template Sequence		G	D	F	V	V	G	M	V	T	D	S	G	D	I	D	D	K	S	F	N	Q	Q	V	W	E	G	I	S	R	F	A	Q	E	N	N	.	.	.	.	A	K	C	K	Y	V	T	A	S	T	D	A	E	Y	V	P	S	L	S	A	F	A	D	E	N	.	M	G	L	V	V	A	C	G
Template Known Secondary structure											S	S	S		T	T	S	S	S																T	T	.	.	.	.										S	G	G	G											T	T	.		S						S
Template Predicted Secondary structure																																					.	.	.	.																										.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions