 |
Job Description | P14376 | Confidence | 97.86% | Date | Thu Jan 5 11:34:01 GMT 2012 |
Rank | 194 | Aligned Residues | 105 |
% Identity | 20% | Template | d1s16a2 |
SCOP info | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
| DNA gyrase/MutL, N-terminal domain
|
Resolution | 2.10 |
|
 |
  |   |
576 | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | |
|
|
. | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 640 |
Predicted Secondary structure |   |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | A | L | N | G | D | P | M | R | L | Q | Q | V | I | S | N | L | L | S | N | A | I | K | F | . |
. |
. |
T | D | T | G | C | I | V | L | H | V | R | A | D | G | D | Y | L | S | I | R | V | R | D | T | G | V | G | I | P | A | K | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | V | R | L | F | D | P | F |
Query Conservation |   |
|   |   |
|   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|   | . | . | . |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   | . |   |
|   |   |   |   |
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   | . | . | . |   |
|   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | G | M | Y | T | D | T | . |
T | R | P | N | H | L | G | Q | E | V | I | D | N | S | V | D | E | A | L | A | G | H | A | K | R | V | D | V | I | L | H | A | D | Q | . |
. |
. |
S | L | E | V | I | D | D | G | R | G | M | P | V | D | I | H | P | E | E | G | V | P | A | V | E | L | I | L | C | R | L | H | A | G | G |
Template Known Secondary structure |   |
G | G | G | T | S |
| T | . | T | S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |
| T | T | S | . | . | . |
|  |  |  |  |  |
| S | S |
|
|
|
| S | B |
| T | T | T |
| S | B |  |  |  |  |  |  |  |
| T | T |
| S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1023 | . | . | . | . | . | . | |
1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | |
|
|
. | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . |
  |
  |   |
641 | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | Q | V | G | T | G | V | Q | R | N | F | Q | G | T | G | L | G | L | A | I | C | E | K | L | I | S | M | M | D | G | D | I | S | V | D | S | E | P | G | M | G | S | Q | F | T | V | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |
|
|   |
|
|   |   |
|
|   |   |   | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | F | S | N | K | N | Y | Q | F | S | G | G | L | H | G | V | G | I | S | V | V | N | A | L | S | K | R | V | . |
. |
. |
E | V | N | V | R | R | D | G | Q | V | Y | N | I | A | F | E |
Template Known Secondary structure |   |
| S | S | S | S | S |
| S | S |
| S |
|
| S | S |
|  |  |  |  |  |  |  | T |  |  |  |  | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1099 | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | |
|
|
. | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|