Job Description P14376 Confidence 90.32% Date Thu Jan 5 11:34:01 GMT 2012 Rank 278 Aligned Residues 73 % Identity 7% Template d1oj5a_ SCOP info Profilin-like PYP-like sensor domain (PAS domain) PAS domain of steroid receptor coactivator 1A, NCo-A1 Resolution 2.2

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		375	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.																						.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure															.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	D	G	V	N	I	L	S	N	E	L	A	.	H	T	Y	L	N	M	L	T	H	E	D	R	Q	R	L	T	Q	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	Q	Q	V	N	F	V	D	V	L	T	S	N	N	T	N	L	Q	I	S	F	V	H	S	R
Query Conservation															.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	T	G	K	I	I	S	I	D	T	S	S	L	R	A	A	G	R	T	G	W	E	D	L	V	R	K	C	I	Y	A	F	F	Q	P	Q	G	R	E	P	S	Y	A	R	Q	L	F	Q	E	V	M	T	R	G	T	A	S	S	P	S	Y	R	F	I	L	N	D	G	T	M	L	S	A	H	T	R	C	K	L
Template Known Secondary structure			T	T													T	T			S														T	S		B	T	T	B															S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	N	E	N	V	A	I	C	V	L	V	D	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	Y	P	M	Q	P	F	I	M	G	I	H	I	I	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions