 |
Job Description | P14376 | Confidence | 63.51% | Date | Thu Jan 5 11:34:01 GMT 2012 |
Rank | 377 | Aligned Residues | 96 |
% Identity | 19% | Template | d1geqa_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 2.00 |
|
 |
  |   |
827 | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | |
|
|
. | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | |
|
. | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | V | V | D | D | H | P | I | N | R | R | L | L | A | D | Q | L | G | S | L | G | Y | Q | . |
. |
. |
C | K | T | A | N | D | G | V | D | A | L | N | V | L | S | K | N | H | I | D | I | V | L | S | D | V | N | M | P | N | M | D | G | . |
. |
Y | R | L | T | Q | R | I | R | Q | L | G | L | T | L | P | V | I | G |
Query Conservation |   |
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   | . | . | . |
|   |   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |
|
|
| . | . |   |
|   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|   | . |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |   |
|
|   |   |
Template Sequence |   |
I | L | V | V | D | L | P | V | F | H | A | K | E | F | T | E | I | A | R | E | E | G | I | K | T | V | F | L | A | A | P | N | T | P | D | E | R | L | K | V | I | D | D | M | T | T | G | F | V | Y | L | . |
V | S | L | Y | E | I | P | K | T | A | Y | D | L | L | R | R | A | K | R | I | C | . |
R | N | K | V | A | V |
Template Known Secondary structure |   |
 |  |  | T | T |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | S | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | |
. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
. | . | . | . | . | . |
  |
  |   |
902 | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | A | N | A | L | A | E | E | K | Q | R | C | L | E | S | G | M | D | S | C | L | S |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |
|
|
|   |   |   |
|   |
|
|
|
|   |
|
|
|
Template Sequence |   |
G | F | G | V | S | K | R | E | H | V | V | S | L | L | K | E | G | A | N | G | V | V | V |
Template Known Secondary structure |   |
 | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|