 |
Job Description | P14376 | Confidence | 82.94% | Date | Thu Jan 5 11:34:01 GMT 2012 |
Rank | 308 | Aligned Residues | 97 |
% Identity | 12% | Template | d1a53a_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 2.00 |
|
 |
  |   |
827 | . | . | 830 | . | . | . | . | . | |
. | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | |
|
|
. | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | V | V | D | D | H | P | I | . |
N | R | R | L | L | A | D | Q | L | G | S | L | G | Y | Q | C | K | T | A | N | D | G | V | D | A | L | N | V | L | S | K | N | H | I | D | I | V | L | S | . |
. |
. |
D | V | N | M | P | N | M | D | G | Y | R | L | T | Q | R | I | R | Q | L | G | L | T | L | P | V | I | G | V |
Query Conservation |   |
|
|
|
|
|
|   |   |   | . |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
| . | . | . |
|
|   |
|
|   |
|
|
|   |
|   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|
|
Template Sequence |   |
L | L | I | V | K | I | L | T | E | R | E | L | E | S | L | L | E | Y | A | R | S | Y | G | M | E | P | L | I | E | I | N | D | E | N | D | L | D | I | A | L | R | I | G | A | R | F | I | G | I | N | S | R | D | L | E | T | L | E | I | N | K | E | N | Q | R | K | L | I | S | M | I | P | S | N | V | V | K | V | A | E |
Template Known Secondary structure |   |
 |  |  | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|  |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S | B |
| T | T | T |
|
| B |
|  |  |  |  |  |  |  |  |  |  | S |
| T | T | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |
  |   |
903 | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | A | N | A | L | A | E | E | K | Q | R | C | L | E | S | G | M | D | S | C | L |
Query Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |
|
|
|   |   |
|   |   |   |
|
|
|
|
|
|
Template Sequence |   |
S | G | I | S | E | R | N | E | I | E | E | L | R | K | L | G | V | N | A | F | L |
Template Known Secondary structure |   |
S |
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
211 | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|