Job Description P14376 Confidence 98.70% Date Thu Jan 5 11:34:01 GMT 2012 Rank 159 Aligned Residues 118 % Identity 17% Template c3na3A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:dna mismatch repair protein mlh1; PDBTitle: mutl protein homolog 1 isoform 1 from homo sapiens Resolution 2.50 Å

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		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Q	V	I	S	N	L	L	S	N	A	I	K	F	T	D	T	G	C	I	V	L	H	V	R	A	D	G	D	Y	L	S	I	R	V	R	D	T	G	V	G	I	P	A	K	E	V	V	R	L	F	D	P	F	F	Q	V	G	T	G	V	Q	R	N	F	Q	G	T	G	L	G	L	A	I	C	E	K	L	I
Query Conservation
Alig confidence																	.										.																																		.	.	.																		.
Template Conservation																	.										.																																		.	.	.																		.
Template Sequence		P	A	N	A	I	K	E	M	I	E	N	C	L	D	A	.	K	S	T	S	I	Q	V	I	V	.	K	E	G	G	L	K	L	I	Q	I	Q	D	N	G	T	G	I	R	K	E	D	L	D	I	V	C	E	R	F	T	T	S	K	.	.	.	L	Q	S	F	G	F	R	G	E	A	L	A	S	I	S	H	V	.
Template Known Secondary structure																T	.	T		S							.		G	G	G	T	S								S					G	G	G	G	G	T	T	T	S	T	T			S	S	.	.	.							T	T									S	.
Template Predicted Secondary structure																	.										.																																		.	.	.																		.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	M	D	G	D	I	S	V	D	S	E	P	G	M	G	S	Q	F	T	V	R	I	P	L	Y	G	A	Q	Y	P	Q	K	K	G	V	E	G	L	S	G	K	R	C	W	L	A	V
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	H	V	T	I	T	T	K	T	A	D	G	K	C	A	Y	R	A	S	Y	S	D	G	K	L	K	A	P	P	K	P	C	A	G	N	Q	G	T	Q	I	T	V	E	D
Template Known Secondary structure		.	.	.	.	S									T	T		S	S								T	T			S	S									S								S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions