Job Description P14376 Confidence 98.03% Date Thu Jan 5 11:34:01 GMT 2012 Rank 186 Aligned Residues 246 % Identity 11% Template c3licA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase sohk1s-z6 Resolution 2.30 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	N	A	L	H	Q	R	E	S	E	I	R	Q	E	F	N	L	S	S	D	Q	A	Q	R	F	I	Q	R	T	S	D	V	M	K	E	L	K	Y	I	A	E	N	R	L	S	A	E	N	G	V	L	S	P	R	G	R	E	T	Q	A	D	V	P	A	F	E	P	L	F	A	D	S	D	C	S	A	M	S	N
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	S	I	E	K	R	L	Y	E	N	L	A	Q	E	S	S	H	S	A	S	R	L	Q	F	L	L	E	H	A	Q	A	N	T	Q	G	L	S	D	F	I	G	L	L	A	D	K	D	D	I	N	N	P	E	K	L	K	T	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																																T	T	T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	R	G	S	L	E	S	L	A	W	F	M	R	Y	W	R	D	N	F	S	A	A	Y	D	L	N	R	V	F	L	I	G	S	D	N	L	C	M	A	N	F	G	L	R	D	M	P	V	E	R	D	T	A	L	K	A	L	H	E	R	I	N	K	Y	R	N	A	P	Q	D	D	S	G	S	N	L	Y	W	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	T	N	R	I	Q	R	N	P	D	F	F	G	S	A	I	A	F	K	P	N	T	F	P	N	K	K	L	F	S	P	Y	V	Y	R	S	G	S	G	F	N	Y	L	D	I	G	A	D	G	Y	D	Y	T	D	G	N	W	D	W	W	S	K	A	I	N	Q	V	G	G	Y	W	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.								T	T										T	T	S	S	T	T		S		B								S	S	S										T			T	T	S	S	S						T	T	T	T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		197	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure							.	.	.																																																																						.	.	.
Query SS confidence							.	.	.																																																																						.	.	.
Query Sequence		S	E	G	P	R	.	.	.	P	G	V	G	Y	F	Y	A	L	T	P	V	Y	L	A	N	R	L	Q	A	L	L	G	V	E	Q	T	I	R	M	E	N	F	F	L	P	G	T	L	P	M	G	V	T	I	L	D	E	N	G	H	T	L	I	S	L	T	G	P	E	S	K	I	K	G	D	P	R	W	.	.	.
Query Conservation							.	.	.																																																																						.	.	.
Alig confidence							.	.	.																																							.																															.	.	.
Template Conservation																																																.
Template Sequence		K	A	Y	F	D	E	G	A	G	N	V	L	X	I	T	Y	A	V	P	F	G	V	Q	P	D	Y	F	G	V	T	T	V	D	L	A	L	D	R	L	P	E	Q	L	G	I	A	.	P	S	R	L	V	V	L	D	D	Q	G	R	L	I	F	H	S	D	K	E	K	V	L	A	G	W	L	D	K	Q	N	I	K
Template Known Secondary structure							T	T	T	T		S										S		T	T												G	G	G						T	S		.	G	G	G						T	T	S						S	S					T				S		T	T	S	G	G
Template Predicted Secondary structure																																																.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
													271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	M	Q	E	R	S	W	F	G	Y	T	E	G	F	R	E	L	V	L	K	K	N	L	P	P	S	S	L	S	I	V	Y	S	V	P	V	D	K	V	L	E	R	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	A	F	A	T	L	L	N	D	G	Q	A	G	Q	A	S	F	V	D	D	K	G	T	V	Y	L	A	S	V	A	E	V	A	K	L	K	W	R	V	V	V	X	V	P	K	H	E	L	F	A	S	L
Template Known Secondary structure		G										T										T	T												T	T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions