Job Description P14376 Confidence 98.05% Date Thu Jan 5 11:34:01 GMT 2012 Rank 185 Aligned Residues 245 % Identity 11% Template c3libA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:hypothetical sensory transduction histidine kinase; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase mmhk1s-z3 Resolution 2.99 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	S	E	I	R	Q	E	F	N	L	S	S	D	Q	A	Q	R	F	I	Q	R	T	S	D	V	M	K	E	L	K	Y	I	A	E	N	R	L	S	A	E	N	G	V	L	S	P	R	G	R	E	T	Q	A	D	V	P	A	F	E	P	L	F	A	D	S	D	C	S	A	M	S	N	T	W	R	G	S	L
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		L	A	Y	Q	Q	S	V	E	M	A	S	N	Y	A	N	Q	F	D	A	D	M	K	A	N	L	A	I	A	R	T	I	S	T	T	M	E	S	Y	E	T	A	D	R	D	E	A	L	L	I	L	E	N	L	L	R	D	N	P	H	L	L	G	T	Y	V	A	F	E	P	D	A	F	D	G	K	.	.	.	.	.
Template Known Secondary structure																																									S																T		T	T		S							S	T	T	T	T	T	S		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	A	W	F	M	R	Y	W	R	D	N	F	S	A	A	Y	D	L	N	R	V	F	L	I	G	S	D	N	L	C	M	A	N	F	G	L	R	D	M	P	V	E	R	D	T	A	L	K	A	L	H	E	R	I	N	K	Y	R	N	A	P	Q	D	D	S	G	S	N	L	Y	W	I	S	E	G	P	R	P
Query Conservation
Alig confidence		.	.	.	.	.																															.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																															.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	D	A	E	Y	T	N	S	P	A	H	D	G	T	G	R	F	V	P	Y	W	N	K	M	N	G	T	A	S	V	A	.	.	.	P	L	L	H	Y	D	S	S	D	Y	Y	Q	L	P	K	A	T	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	L	T	E	P	Y	F	Y	E
Template Known Secondary structure		.	.	.	.	.					T	T	S	T	T			T	T										T	T	S	S					.	.	.			S		T	T	T	S											S	.	.	.	.	.	.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure		.	.	.	.	.																															.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.														.	.	.	.	.	170	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																									.	.	.																																	.	.	.	.	.	.
Query SS confidence																																									.	.	.																																	.	.	.	.	.	.
Query Sequence		G	V	G	Y	F	Y	A	L	T	P	V	Y	L	A	N	R	L	Q	A	L	L	G	V	E	Q	T	I	R	M	E	N	F	F	L	P	G	T	L	P	.	.	.	M	G	V	T	I	L	D	E	N	G	H	T	L	I	S	L	T	G	P	E	S	K	I	K	G	D	P	R	W	M	Q	E	.	.	.	.	.	.
Query Conservation																																									.	.	.																																	.	.	.	.	.	.
Alig confidence																																									.	.	.																																	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	F	M	V	S	Y	V	S	P	I	M	K	E	G	E	F	A	G	I	G	G	V	D	V	S	L	E	Y	V	D	E	V	V	S	K	V	R	T	F	D	T	G	Y	A	F	M	V	S	N	S	G	V	I	L	S	H	P	T	H	K	D	W	I	G	K	K	D	L	Y	D	F	G	G	E	E	L	E	K	A
Template Known Secondary structure		T													T	T																								B	T	T	T	B							T	T		B	B				S	S		T	T	T	T	T	T		B	T	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
													274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	R	S	W	F	G	Y	T	E	G	F	R	E	L	V	L	K	K	N	L	P	P	S	S	L	S	I	V	Y	S	V	P	V	D	K	V	L	E	R	I	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	D	I	K	N	G	I	G	G	H	L	E	T	A	D	P	T	T	G	K	T	V	I	L	F	Y	E	P	V	E	T	G	D	F	A	F	V	L	V	V	P	K	E	E	M	L	A	G	V	A
Template Known Secondary structure							T	T										S	S	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions