Job Description P14376 Confidence 97.53% Date Thu Jan 5 11:34:01 GMT 2012 Rank 209 Aligned Residues 240 % Identity 9% Template c3liaA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:hypothetical sensory transduction histidine kinase; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase mmhk1s-z2 Resolution 1.99 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	S	E	I	R	Q	E	F	N	L	S	S	D	Q	A	Q	R	F	I	Q	R	T	S	D	V	M	K	E	L	K	Y	I	A	E	N	R	L	S	A	E	N	G	V	L	S	P	R	G	R	E	T	Q	A	D	V	P	A	F	E	P	L	F	A	D	S	D	C	S	A	M	S	N	T	W	R	G	S	L	E
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		A	Y	E	K	S	I	E	M	A	G	N	Y	A	N	Q	F	D	A	Q	M	E	A	N	Q	A	I	A	R	T	L	A	C	T	M	A	E	Y	G	S	Q	D	R	E	E	A	M	S	I	I	K	R	I	L	N	E	N	P	Q	L	I	G	V	Y	L	G	Y	E	P	D	A	F	D	G	R	D	K	N	.	.	.
Template Known Secondary structure																																								S																		T	T		S								T	T	T	T	T	S		G	G	G	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	W	F	M	R	Y	W	R	D	N	F	S	A	A	Y	D	L	N	R	V	F	L	I	G	S	D	N	L	C	M	A	N	F	G	L	R	D	M	P	V	E	R	D	T	A	L	K	A	L	H	E	R	I	N	K	Y	R	N	A	P	Q	D	D	S	G	S	N	L	Y	W	I	S	E	G	P	R	P	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.																												.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																												.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	Y	I	N	A	P	G	H	D	S	T	G	R	F	V	P	Y	C	N	K	I	N	G	P	V	I	I	E	.	.	.	P	L	V	H	Y	D	S	S	D	Y	Y	Q	L	P	K	T	T	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	L	T	E	P	Y	F	Y	E	G
Template Known Secondary structure		.	.	.	.	.	.	.		T	T		T	T			T	T										T	T	S	S					.	.	.					T	T	T												S	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																												.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.														.	.	.	.	170	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																										.	.	.																																.	.	.	.	.	.
Query SS confidence																																										.	.	.																																.	.	.	.	.	.
Query Sequence		V	G	Y	F	Y	A	L	T	P	V	Y	L	A	N	R	L	Q	A	L	L	G	V	E	Q	T	I	R	M	E	N	F	F	L	P	G	T	L	P	M	G	.	.	.	V	T	I	L	D	E	N	G	H	T	L	I	S	L	T	G	P	E	S	K	I	K	G	D	P	R	W	M	Q	E	R	.	.	.	.	.	.
Query Conservation																																										.	.	.																																.	.	.	.	.	.
Alig confidence																																										.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	M	V	S	Y	D	S	P	I	F	K	N	G	E	F	A	G	I	A	G	V	D	V	P	L	E	Y	V	D	D	V	A	S	S	I	R	T	F	D	T	G	Y	A	F	M	V	S	N	T	G	I	F	L	S	H	P	T	Q	K	N	W	I	G	E	K	S	L	S	D	F	D	V	E	E	I	K	N	A	A
Template Known Secondary structure														T	T																				T	T			B	T	T	T	B							T	T		B	B	S			S	S		G	G	G	T	T	T		B	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
													275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	S	W	F	G	Y	T	E	G	F	R	E	L	V	L	K	K	N	L	P	P	S	S	L	S	I	V	Y	S	V	P	V	D	K	V	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	I	R	E	G	I	G	G	H	V	E	I	K	D	P	I	T	G	K	T	V	I	M	F	Y	E	P	V	K	T	G	D	F	S	F	V	L	V	V	P	K	E	E	M	L
Template Known Secondary structure						T	T										T	T	T	T											T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions