Job Description P14376 Confidence 95.79% Date Thu Jan 5 11:34:01 GMT 2012 Rank 253 Aligned Residues 87 % Identity 20% Template c3gecA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:period circadian protein; PDBTitle: crystal structure of a tandem pas domain fragment of2 drosophila period Resolution 4.00 Å

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		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.														.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	C	I	L	R	T	A	D	G	V	N	I	L	S	N	E	L	A	H	T	Y	L	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	H	E	D	R	Q	R	L	T	Q	I	I	C	G	Q	Q	V	N	F	V	D	V	L	T	S	N	N	T	N	L	Q	I	S	F	V	H	S	R	Y	R	N	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	C	V	I	S	M	H	D	G	I	V	L	Y	T	T	P	S	I	T	D	V	L	G	Y	P	R	D	M	W	L	G	R	S	F	I	D	F	V	H	L	K	D	R	A	T	F	A	S	Q	I	T	T	G	I	S	T	F	C	V	M	L	R	R	Y	R	G	S	Y	E	P	F	R	L	G	L	T	F	R	E	M
Template Known Secondary structure							S	S					S				T	T					T	S	S						S	S	S		G	G	G	S	B		T	T	T								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	A	I	C	V	L	V	D	V	S	S	R	V	K	M	E	E	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	I	C	A	T	P	I	K	S	S	Y	K	V	P	D	E	I	L
Template Known Secondary structure													S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions