Job Description P14376 Confidence 97.50% Date Thu Jan 5 11:34:01 GMT 2012 Rank 212 Aligned Residues 212 % Identity 10% Template c3e4pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:c4-dicarboxylate transport sensor protein dctb; PDBTitle: crystal structure of malonate occupied dctb Resolution 2.30 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Q	E	F	N	L	S	S	D	Q	A	Q	R	F	I	Q	R	T	S	D	V	M	K	E	L	K	Y	I	A	E	N	R	L	S	A	E	N	G	V	L	S	P	R	G	R	E	T	Q	A	D	V	P	A	F	E	P	L	F	A	D	S	D	C	S	A	M	S	N	T	W	R	G	S	L	E	S	L	A	W
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	G	Q	S	R	I	D	A	S	L	K	A	S	L	L	R	A	V	V	E	R	Q	R	A	L	P	L	V	L	A	D	D	A	A	I	R	G	A	L	L	S	P	D	R	P	S	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																T	T										S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		F	M	R	Y	W	R	D	N	F	S	A	A	Y	D	L	N	R	V	F	L	I	G	S	D	N	L	C	M	A	N	.	.	.	.	.	.	F	G	L	R	D	M	P	V	E	R	D	T	A	L	K	A	L	H	E	R	I	N	K	Y	R	N	A	P	Q	D	D	S	G	S	N	L	Y	W	I	S	E	G	P	R
Query Conservation																																.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	N	R	K	L	E	A	L	A	T	S	A	E	A	A	V	I	Y	L	I	D	R	S	G	V	A	V	A	A	S	N	W	Q	E	P	T	S	F	V	G	N	D	Y	A	F	R	D	Y	F	R	L	A	V	R	D	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	H	F	A	M	G	T	V
Template Known Secondary structure															T		S							T	T	S	B					T	T	T	T	S	T	T			T	T		B		T	T											S		.	.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.														.	.	.	.	.	.	170	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	V	G	Y	F	Y	A	L	T	P	V	Y	L	A	N	R	L	Q	A	L	L	G	V	E	Q	T	I	R	M	E	N	F	F	L	P	G	T	L	P	M	G	V	T	I	L	D	E	N	G	H	T	L	I	S	L	T	G	P	E	S	K	I	K	G	D	P	R	W	M	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.																																.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		S	K	R	P	G	L	Y	I	S	R	R	V	D	G	P	G	G	P	L	G	V	I	V	A	K	L	E	F	D	G	V	E	A	D	W	Q	A	S	.	G	K	P	A	Y	V	T	D	R	R	G	I	V	L	I	T	S	L	P	S	W	R	F	M	T	T	K	P	I	A	E	D	R	L	A	P	I	R	E	S	L
Template Known Secondary structure		T														T	T																					T	T	.	S	S							T	T		B					S	S	G	G	G	T	T		B	S	S				S	T	T								T
Template Predicted Secondary structure																																								.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
																									272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	R	S	W	F	G	Y	T	E	G	F	R	E	L	V	L	K	K	N	L	P	P	S	S	L	S	I	V	Y	S	V	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	G	D	A	P	L	L	P	L	P	F	R	K	I	E	A	R	P	D	G	S	S	T	L	D	A	L	L	P	G	D	S	T	A	A	F	L	R	V	E	T	M	V	P	S	T	N	W	R	L	E	Q	L	S	P
Template Known Secondary structure		T		T	T					B		S								T	T	S									S	S	S													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions