 |
| Job Description | P14376 | | Confidence | 36.62% | Date | Thu Jan 5 11:34:01 GMT 2012 |
| Rank | 495 | Aligned Residues | 66 |
| % Identity | 15% | Template | c3dmgA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; |
PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy
|
| Resolution | 1.55 Å |
|
| | |
823 | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | |
. | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | |
|
. | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 |
| Predicted Secondary structure | |
|
|
|  | | | |  |
|
|
|  | | | | | | | | | | | | |
|
|
| | | | | . | |
|
| | | | | | | | | |
|
|
|
|
| | | | | | . | . |
|
|
|
|
|
|
| | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
D | D | M | M | I | L | V | V | D | D | H | P | I | N | R | R | L | L | A | D | Q | L | G | S | L | G | Y | Q | C | K | T | . |
A | N | D | G | V | D | A | L | N | V | L | S | K | N | H | I | D | I | V | L | S | D | . |
. |
V | N | M | P | N | M | D | G | Y | R | L | T | Q | R | I |
| Query Conservation | |
| | | |
|
|
|
|
|
| | | |
| | | |
| | | |
| | | |
| | |
| | | . |
| |
|
| |
|
|
| | | | | | | | |
|
|
|
|
|
| . | . |
| |
|
| |
|
|
| |
| |
|
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | |
| | |
|
| | | | |
|
| | |
| | |
| | | | | | | | | | | | | |
| | | | | | . | . | | | | | |
|
| |
|
| |
|
|
| | | | | | | | | | | | | | | |
| Template Sequence | |
M | G | A | E | V | V | G | V | E | D | D | L | A | S | V | L | S | L | Q | K | G | L | E | A | N | A | L | K | A | Q | A | L | H | S | D | V | D | E | A | L | . |
. |
T | E | E | A | R | F | D | I | I | V | T | N | P | P | F | H | V | G | G | A | V | I | L | D | V | A | Q | A | F |
| Template Known Secondary structure | |
T | T |
| | | | | | | S | B | | | | | | | | | | | | | | T | T |
|
|
| | | | |
| S | T | T | T | T | S | . | . |
| T | T |
|
| | | | | | |
|
|
|
|
| T | T |
| S | S |
|
| | | | | | |
| Template Predicted Secondary structure | |
|
|
| | | | | | |
|
| | | | | | | | | | | | | |
|
|
|
|
| | | | |
|
|
| | |
|
| . | . |
|
|
|
|
| | | | | | | |
|
| | |
|
|
|
|
|
| | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | |
|
. | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
