Job Description P14376 Confidence 100.00% Date Thu Jan 5 11:34:01 GMT 2012 Rank 2 Aligned Residues 266 % Identity 16% Template c3d2rB_ PDB info PDB header:transferase Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp Resolution 2.03 Å

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		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.								.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		S	S	R	V	K	M	E	E	S	L	Q	E	M	A	Q	A	A	E	Q	A	S	Q	S	K	S	M	F	L	A	T	V	S	H	E	L	R	T	P	L	Y	G	I	I	G	N	L	D	L	L	Q	.	.	.	.	.	.	.	T	K	E	L	P	K	G	V	D	R	L	V	T	A	M	N	N	S	S	S	L	L	L
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	W	Y	I	Q	S	L	M	D	L	V	E	F	H	E	K	S	P	D	D	Q	K	A	L	S	D	F	V	D	T	L	I	K	V	R	N	R	H	H	N	V	V	P	T	M	A	Q	G	I	I	E	Y	K	A	C	T	V	D	P	V	T	N	Q	N	L	Q	Y	F	L	D	R	F	Y	M	N	R	I	S	T	R
Template Known Secondary structure													G	G	G	G	S		T	T																			T	T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540					.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.								.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																						.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																						.	.	.	.	.	.	.
Query Sequence		K	I	I	S	D	I	L	D	F	S	K	I	E	S	E	Q	L	K	I	E	P	.	.	.	.	R	E	F	S	P	R	E	V	M	N	H	I	T	A	N	Y	L	P	L	V	V	.	.	.	.	.	.	.	R	K	Q	L	G	L	Y	C	F	I	E	P	D	V	P	V	A	L	N	G	D	P	M	R	L	Q	Q
Query Conservation																							.	.	.	.																						.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	M	N	Q	H	I	L	I	F	S	D	S	Q	T	G	N	P	S	H	I	G	S	I	D	P	N	C	D	V	V	A	V	V	Q	D	A	F	E	C	S	R	M	L	C	D	Q	Y	Y	L	S	S	P	E	L	K	L	T	Q	V	N	G	K	F	P	D	Q	P	I	H	I	V	Y	V	P	S	H	L	H	H
Template Known Secondary structure													S	S					T	T	S	B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		589	590	.	.	.	.	.	.	.	.	.	600	.									.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure															.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.
Query Sequence		V	I	S	N	L	L	S	N	A	I	K	F	T	.	.	.	.	.	.	.	.	D	T	G	C	I	V	L	H	V	R	A	D	G	D	Y	L	S	I	R	V	R	D	T	G	V	G	I	P	A	K	E	V	V	R	L	F	D	P	F	F	Q	V	G	T	G	V	Q	R	N	F	Q	G	T	G	L	G	L	A	I
Query Conservation															.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.																																													.	.
Template Conservation																																																																			.	.
Template Sequence		M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	H	Q	E	N	Q	P	S	L	T	P	I	E	V	I	V	V	L	G	K	E	D	L	T	I	K	I	S	D	R	G	G	G	V	P	L	R	I	I	D	R	L	F	S	Y	T	Y	S	T	A	P	.	.	T	P	P	L	A	G	F	G	Y	G	L	P	I
Template Known Secondary structure																		T	T	T	S	S	S												S	S										S					G	G	G	T	T	G	G	G	S	T	T			S	S		.	.					S	S	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.
		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	K	L	I	S	M	M	D	G	D	I	S	V	D	S	E	P	G	M	G	S	Q	F	T	V	R	I	P	L	Y	G	A	Q	Y	P	Q	K	K	G	V	E	G	L	S	G	K	R	C	W	L	A	V	R	N	A	S	L	C	Q	F	L	E	T	S	L	Q	R	S	G	I	V	V
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	L	Y	A	K	Y	F	Q	G	D	L	N	L	Y	S	L	S	G	Y	G	T	D	A	I	I	Y	L	K	A	L	S	S	E	S	I	E	K	L	P	V	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	A	F	K	H	Y	D	W	C	I
Template Known Secondary structure									T	T									T	T	T										S	S	T	T	T		B							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.																				380	.	.	.	.	.	.	.	.	.	390

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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