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Job DescriptionP14376
Confidence95.19%DateThu Jan 5 11:34:01 GMT 2012
Rank257Aligned Residues100
% Identity14%Templatec3cloC_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   351........360.........370.........380.........390.... .....400..
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Query Sequence  RLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLNML. . . . . . . . . . . . . . . . . . . . . THEDRQRL. . . . . . .
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Template Sequence  IVEQHQQFVRSLTEVNGGCAVISDLSNRKSYVTVHPWANFLGLTPEEAALSVIDSXDEDCIYRRIHPEDLVEKRLXEYKF
Template Known Secondary structure  S
TTTT
TT
GGG


TT


TTTB
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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   403......410.........420.........430... ......440.........450
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Query Sequence  . . . . . . . . . TQIICGQQVNFVDVLTSNNTNLQISFVHSRY. . . . . RNENVAICVLVDVSSRV
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Template Sequence  FQKTFSXSPGERLKYRGRCRLRXXNEKGVYQYIDNLVQIXQNTPAGNVWLIFCLYSLSADQR
Template Known Secondary structure  TS
TT
TTS

TTS

S


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   106...110.........120.........130.........140.........150.........160.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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