Job Description P14376 Confidence 66.02% Date Thu Jan 5 11:34:01 GMT 2012 Rank 369 Aligned Residues 116 % Identity 16% Template c3c2wB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:bacteriophytochrome; PDBTitle: crystal structure of the photosensory core domain of p.2 aeruginosa bacteriophytochrome pabphp in the pfr state Resolution 2.90 Å

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		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.											.	430	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	G	I	C	I	L	R	T	A	D	G	V	N	I	L	S	N	E	L	A	H	T	Y	L	N	M	L	T	H	E	D	R	Q	R	L	T	Q	I	I	C	G	Q	Q	V	N	F	V	D	V	L	T	S	N	N	T	N	L	Q	I	S	F	.	.	.	.	.	.	.	.	.	.	V	H	S	R	Y	R	N	E
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	H	G	A	L	V	T	L	R	A	D	G	M	V	L	A	A	S	E	N	I	Q	A	L	L	G	F	V	A	S	P	G	S	Y	L	T	Q	E	Q	V	G	P	E	V	L	R	M	L	E	E	G	L	T	G	N	G	P	W	S	N	S	V	E	T	R	I	G	E	H	L	F	D	V	I	G	H	S	Y	K	E
Template Known Secondary structure		T	T								T	T		B						T	T					S	S	S				T	T		B																			T			S											S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.			470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		N	V	A	I	C	V	L	V	D	V	S	S	R	V	K	M	E	E	S	L	Q	E	M	A	Q	A	A	E	Q	A	S	Q	S	.	.	K	S	M	F	L	A	T	V	S	H	E	L	R
Query Conservation																																			.	.
Alig confidence																																			.	.
Template Conservation
Template Sequence		V	F	Y	L	E	F	E	I	R	T	A	D	T	L	S	I	T	S	F	T	L	N	A	Q	R	I	I	A	Q	V	Q	L	H	N	D	T	A	S	L	L	S	N	V	T	D	E	L	R
Template Known Secondary structure															S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions