Return to main results Retrieve Phyre Job Id

Job DescriptionP14376
Confidence82.47%DateThu Jan 5 11:34:01 GMT 2012
Rank309Aligned Residues94
% Identity14%Templatec3b9qA_
PDB info PDB header:protein transportChain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   823......830... ......840.........850....... ..860.........870.........880.........890...
Predicted Secondary structure 





...




......











Query SS confidence 










. . .























. . . . . .



































Query Sequence  DDMMILVVDDH. . . PINRRLLADQLGSLGYQCKTANDG. . . . . . VDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQL
Query Conservation      





 ...  
   
   
   
  
  
 

...... 


        






 

 


 
 

 

  
Alig confidence 










...























......



































Template Conservation   
  
 

  

 
 

 


   
   

                          
 







         

   
Template Sequence  EGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEKAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIAC
Template Known Secondary structure  TT





S
T






TT
S




SS

Template Predicted Secondary structure 




























Template SS confidence 















































































   191........200.........210.........220.........230.........240.........250.........260.........270
 
   894.....900.........910......
Predicted Secondary structure  ..........








Query SS confidence  . . . . . . . . . .






















Query Sequence  . . . . . . . . . . GLTLPVIGVTANALAEEKQRCLE
Query Conservation  ..........    



 

            
Alig confidence  ..........






















Template Conservation             
    


 

           
Template Sequence  KKAVGKIVSGAPNEILLVLDGNTGLNMLPQARE
Template Known Secondary structure  TTSTT

SGGGGGGG
Template Predicted Secondary structure 










Template SS confidence 
































   273......280.........290.........300.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions