Job Description P14376 Confidence 100.00% Date Thu Jan 5 11:34:01 GMT 2012 Rank 8 Aligned Residues 313 % Identity 25% Template c3a0rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360) Resolution 3.80 Å

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		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.															.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	R	K	I	V	A	S	A	P	V	G	I	C	I	L	R	T	A	D	G	V	N	I	L	S	N	E	L	A	H	T	Y	L	N	M	L	T	H	E	D	R	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	Q	I	I	C	G	Q	Q	V	N	F	V	D	V	L	T	S	N	N	T	N
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		F	S	E	S	I	L	E	S	L	E	T	A	I	I	T	L	S	.	K	D	G	R	I	T	E	W	N	K	K	A	E	Q	L	F	G	L	K	K	E	N	V	L	G	R	R	L	K	D	L	P	D	F	E	E	I	G	S	V	A	E	S	V	F	E	N	K	E	P	V	F	L	N	F	Y	K	F	G	E	R	Y
Template Known Secondary structure					S	S	G	G	G	S	S	S							.	S	S	S	B		S		B									S			S	T	T	T	T	T		B	S	T	T	S	T	T	T	T																							B	T	T	B
Template Predicted Secondary structure																			.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.				.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		L	Q	I	S	F	V	H	S	R	Y	R	N	E	N	.	.	.	V	A	I	C	V	L	V	D	V	S	S	R	V	K	M	E	E	S	L	Q	E	M	A	Q	A	A	E	Q	A	S	Q	S	K	S	M	F	L	A	T	V	S	H	E	L	R	T	P	L	Y	G	I	I	G	N	L	D	L	L	Q	T	K	E	L
Query Conservation																.	.	.
Alig confidence																.	.	.																											.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		F	N	I	R	F	S	P	F	R	N	A	K	T	Q	L	L	E	G	V	I	I	T	I	D	D	V	T	E	L	Y	K	Y	E	E	E	R	K	R	R	E	R	L	S	.	.	.	.	.	I	L	G	E	M	T	A	R	V	A	H	E	I	R	N	P	I	T	I	I	G	G	F	I	M	R	M	K	K	H	L	D
Template Known Secondary structure												T	T	T	T	S	S											S	T	T	T	T	T	T	T	T	T	T							.	.	.	.	.																												T	T	S		S
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.						.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
			501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	P	K	G	V	D	R	L	V	T	A	M	N	N	S	S	S	L	L	L	K	I	I	S	D	I	L	D	F	S	K	I	E	S	E	Q	L	K	I	E	P	R	E	F	S	P	R	E	V	M	N	H	I	T	A	N	Y	L	P	L	V	V	R	K	Q	L	G	L	Y	C	F	I	E	P	D	V	P	V	A	L
Query Conservation		.
Alig confidence		.																															.	.	.	.																																											.
Template Conservation																																	.	.	.	.																																											.
Template Sequence		D	P	E	T	L	K	K	Y	I	N	I	I	T	N	E	L	S	R	L	E	T	I	V	K	E	I	L	E	Y	S	K	.	.	.	.	E	R	V	L	E	F	T	E	F	N	L	N	E	L	I	R	E	V	Y	V	L	F	E	E	K	I	R	K	M	N	I	D	F	C	F	E	T	D	N	E	D	L	.	R	V
Template Known Secondary structure			S	S		T	T																										.	.	.	.																											T	T	T	T								S		S			.
Template Predicted Secondary structure																																	.	.	.	.																																											.
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.					600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.		.	.
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.		.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		N	G	D	P	M	R	L	Q	Q	V	I	S	N	L	L	S	N	A	I	K	F	T	.	D	T	G	C	I	V	L	H	V	R	A	D	G	D	Y	L	S	I	R	V	R	D	T	G	V	G	I	P	A	K	E	V	V	R	L	F	D	P	F	F	Q	V	G	T	G	V	Q	R	N	F	Q	G	T	G	L	G	L
Query Conservation																								.
Alig confidence																								.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	D	R	T	R	I	K	Q	V	L	I	N	L	V	Q	N	A	I	E	A	T	G	E	N	G	K	I	K	I	T	S	E	D	M	Y	T	K	V	R	V	S	V	W	N	S	G	P	P	I	P	E	E	L	K	E	K	I	F	S	P	F	.	.	.	.	.	.	.	.	.	.	.	.	F	T	T	L	G	L
Template Known Secondary structure																	T					T	T		T	T											T	T										S					G	G	G	G	T	T	T	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.													.	.	.	710	.	.
		659	660	.	.	.	.	.	.		.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		A	I	C	E	K	L	I	S	.	M	M	D	G	D	I	S	V	D	S	E	P	G	M	G	S	Q	F	T	V	R	I	P	L	Y	G	A	Q
Query Conservation										.
Alig confidence										.												.
Template Conservation																						.
Template Sequence		S	I	C	R	K	I	I	E	D	E	H	G	G	K	I	W	T	E	N	R	.	E	N	G	V	V	F	I	F	E	I	P	K	T	P	E	K
Template Known Secondary structure		T									T	T		S	B							.	S	S										S		T	T
Template Predicted Secondary structure																						.
Template SS confidence
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.		.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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