Job Description P14376 Confidence 100.00% Date Thu Jan 5 11:34:01 GMT 2012 Rank 5 Aligned Residues 252 % Identity 18% Template c2q8fA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1 Resolution 2.03 Å

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		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.							.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		S	R	V	K	M	E	E	S	L	Q	E	M	A	Q	A	A	E	Q	A	S	Q	S	K	S	M	F	L	A	T	V	S	H	E	L	R	T	P	L	Y	G	I	I	G	N	L	D	L	L	Q	.	.	.	.	.	.	T	K	E	L	P	K	G	V	D	R	L	V	T	A	M	N	N	S	S	S	L	L	L	K	I
Query Conservation																																																			.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.
Template Conservation
Template Sequence		W	Y	I	Q	S	L	Q	E	L	L	D	F	K	D	K	S	A	E	D	A	K	A	I	Y	D	F	T	D	T	V	I	R	I	R	N	R	H	N	D	V	I	P	T	M	A	Q	G	V	I	E	Y	K	E	S	F	D	P	V	T	S	Q	N	V	Q	Y	F	L	D	R	F	Y	M	S	R	I	S	I	R	M	L
Template Known Secondary structure											G	G	G	T	T	S		T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.								.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.
Query Sequence		I	S	D	I	L	D	F	S	K	I	E	S	E	Q	L	K	I	E	P	R	E	F	S	P	R	E	V	M	N	H	I	T	A	N	Y	L	P	L	V	V	R	.	.	.	.	.	.	.	K	Q	L	G	L	Y	C	F	I	E	P	D	V	P	V	A	L	N	G	D	P	M	R	L	Q	Q	V	I	S	N	L	L
Query Conservation																																											.	.	.	.	.	.	.
Alig confidence											.	.	.	.																													.	.	.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		L	N	Q	H	S	L	L	F	G	.	.	.	.	H	I	G	S	I	N	P	N	C	N	V	L	E	V	I	K	D	G	Y	E	N	A	R	R	L	C	D	L	Y	Y	I	N	S	P	E	L	E	L	E	E	L	N	A	K	S	P	G	Q	P	I	Q	V	V	Y	V	P	S	H	L	Y	H	M	V	F	E	L	F
Template Known Secondary structure											.	.	.	.		B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		595	.	.	.	.	600	.									.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.							.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure									.	.	.	.	.	.	.	.																																									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																																									.	.	.	.	.	.
Query Sequence		S	N	A	I	K	F	T	.	.	.	.	.	.	.	.	D	T	G	C	I	V	L	H	V	R	A	D	G	D	Y	L	S	I	R	V	R	D	T	G	V	G	I	P	A	K	E	V	V	R	L	F	D	P	F	F	.	.	.	.	.	.	Q	V	G	T	G	V	Q	R	N	F	Q	G	T	G	L	G	L	A	I
Query Conservation									.	.	.	.	.	.	.	.																																									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																																									.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	A	M	R	A	T	M	E	H	H	A	N	R	G	V	Y	P	P	I	Q	V	H	V	T	L	G	N	E	D	L	T	V	K	M	S	D	R	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	T	A	P	R	P	R	V	E	T	S	R	A	V	P	L	A	G	F	G	Y	G	L	P	I
Template Known Secondary structure												S	T	T	T	T													S	S										S									G	G	G	G		T	T	T	T							S	S			S				S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	K	L	I	S	M	M	D	G	D	I	S	V	D	S	E	P	G	M	G	S	Q	F	T	V	R	I	P	L	Y	G	A	Q	Y	P	Q	K	K	G	V	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	L	Y	A	Q	Y	F	Q	G	D	L	K	L	Y	S	L	E	G	Y	G	T	D	A	V	I	Y	I	K	A	L	S	T	D	S	I	E	R	L	P	V	Y	N
Template Known Secondary structure									T	T									T	T	T										S	S	T	T	T		B							S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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