Job Description P14376 Confidence 99.54% Date Thu Jan 5 11:34:01 GMT 2012 Rank 146 Aligned Residues 111 % Identity 19% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.					.	.	.	.	.	610	.	.	.	.		.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.											.
Query SS confidence																								.	.	.	.											.
Query Sequence		P	M	R	L	Q	Q	V	I	S	N	L	L	S	N	A	I	K	F	T	D	T	G	.	.	.	.	C	I	V	L	H	V	R	A	D	G	.	D	Y	L	S	I	R	V	R	D	T	G	V	G	I	P	A	K	E	V	V	R	L	F	D	P	F	F	Q	V	G	T	G	V	Q	R	N	F	Q	G	T	G	L	G
Query Conservation																								.	.	.	.											.
Alig confidence																								.	.	.	.											.																														.
Template Conservation																																																																				.
Template Sequence		P	R	S	L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	.	F	H	A	L	K	S	R	G	Q	Q	G	I	G
Template Known Secondary structure																					T	T	T	S		S											T	T	T										S					G	G	G						S						.								S	S	S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.
		658	.	660	.	.	.	.	.	.	.	.	.	670	.		.	.	.	.	.	.		.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
Predicted Secondary structure																.							.
Query SS confidence																.							.
Query Sequence		L	A	I	C	E	K	L	I	S	M	M	D	G	D	.	I	S	V	D	S	E	.	P	G	M	G	S	Q	F	T	V	R	I	P	L	Y	G	A	Q
Query Conservation																.							.
Alig confidence																.							.
Template Conservation
Template Sequence		I	S	A	A	V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M	I	N	T	S	T
Template Known Secondary structure													T											S	S	S	S											S	S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions