 |
Job Description | P14376 | Confidence | 96.93% | Date | Thu Jan 5 11:34:01 GMT 2012 |
Rank | 237 | Aligned Residues | 95 |
% Identity | 22% | Template | c2o1wB_ |
PDB info |
PDB header:chaperone | Chain: B: PDB Molecule:endoplasmin; |
PDBTitle: structure of n-terminal plus middle domains (n+m) of grp94
|
Resolution | 3.40 Å |
|
 |
  |   |
589 | 590 | . | . | . | . | . | . | . | . | . | 600 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | |
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
V | I | S | N | L | L | S | N | A | I | K | F | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | T | G | C | I | V | L | H | V | R | A | D | G | D | Y | L | S | I | R | V | R | D | T | G | V | G | I | P | A | K | E | V | V | R | L | F | D | P | F | F | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|   |
|
|
|   |
|
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
F | L | R | E | L | I | S | N | A | S | D | A | L | D | K | I | R | L | I | S | L | T | D | E | N | A | L | A | G | N | E | E | L | T | V | K | I | K | C | D | K | E | K | N | L | L | H | V | T | D | T | G | V | G | M | T | R | E | E | L | V | K | N | L | G | T | I | A | K | S | G | T | S | E | F | L | N | K | M | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | G | G | G | G |
| S |
|
|
|  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |
| S | S |
|
|
|  |  |  |  |  |  |  | T | T | S |
|
| S | S |
| T | T | T | T | T | T | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
643 | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
V | G | T | G | V | Q | R | N | F | Q | G | T | G | L | G | L | A | I | C | E | K | L | I | S | M | M | D | G | D | I | S | V | D | S | E | P | G | M | G | S | Q | F | T | V | R |
Query Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |
|
|   |
|   |   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |
| . | . | . | . |
|
|
|
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
E | A | Q | E | D | G | Q | S | T | S | E | L | I | G | Q | F | G | V | G | F | Y | S | A | F | . |
. |
. |
. |
L | V | A | D | K | V | I | V | T | S | K | H | N | N | D | T | Q | H | I | W | E |
Template Known Secondary structure |   |
T | S | S | S | S | S |
|
|  |  |  |  |  |  |  | T | T |
| T | T | G | G | G | G | . | . | . | . | G | T |  |  |  |  |  |  |  |  |  |
| T | T | S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|
|
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|