Return to main results Retrieve Phyre Job Id

Job DescriptionP14376
Confidence99.88%DateThu Jan 5 11:34:01 GMT 2012
Rank122Aligned Residues110
% Identity20%Templatec2j48A_
PDB info PDB header:transferaseChain: A: PDB Molecule:two-component sensor kinase; PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   826...830.........840.........850.........860.........870.........880.........890.... .....900...
Predicted Secondary structure 




















..



Query SS confidence 




































































. .








Query Sequence  MILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLG. . LTLPVIGVT
Query Conservation   





   
   
   
   
  
  
 

 


        






 

 


 
 

 

   ..   



 
Alig confidence 




































































..








Template Conservation 






       
   
   
  
        

  
    




 
  
    
      

        


  
Template Sequence  HILLLEEEDEAATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFL
Template Known Secondary structure 


TT
S


S
STT

TT


SS


Template Predicted Secondary structure 

























Template SS confidence 















































































   629630.........640.........650.........660.........670.........680.........690.........700........
 
   904.....910.........920.........930........
Predicted Secondary structure 











Query SS confidence 


































Query Sequence  ANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTL
Query Conservation 
            



  
 


    
   
  
Alig confidence 



...



























Template Conservation      ...       
    
 

     
   
  
Template Sequence  GEPP. . . VDPLLTAQASAILSKPLDPQLLLTTLQG
Template Known Secondary structure  SS

...SS
S
SS
STTT
Template Predicted Secondary structure 
...







Template SS confidence 


































   709710.. .......720.........730.........740
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions