Job Description P14376 Confidence 97.27% Date Thu Jan 5 11:34:01 GMT 2012 Rank 221 Aligned Residues 125 % Identity 18% Template c1zxnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme; PDBTitle: human dna topoisomerase iia atpase/adp Resolution 2.51 Å

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		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.					.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.													.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	Q	V	I	S	N	L	L	S	N	A	I	K	F	T	.	.	.	.	D	T	G	C	I	V	L	H	V	R	A	D	G	D	Y	L	S	I	R	V	R	D	T	G	V	G	I	P	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	V	V	R	L	F	D	P	F	F	Q	V	G	T	G	V	Q	R
Query Conservation																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.
Template Sequence		L	Y	K	I	F	D	E	I	L	V	N	A	A	D	N	K	Q	R	D	P	K	M	S	C	I	R	V	T	I	D	P	E	N	N	L	.	.	I	S	I	W	N	N	G	K	G	I	P	V	V	E	H	K	V	E	K	M	Y	V	P	A	L	I	F	G	Q	L	L	T	S	S	N	Y	D	D	D	E	K	K	V
Template Known Secondary structure																G	G	G	T		T	T										T	T	T	T		.	.							S	S					S			T	T	T	T										S	S	S			S				G	G	G
Template Predicted Secondary structure																																					.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.		.	.	680	.	.	.	.	.	.	.	.	.			690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.
Predicted Secondary structure																														.													.	.
Query SS confidence																														.													.	.
Query Sequence		N	F	Q	G	T	G	L	G	L	A	I	C	E	K	L	I	S	M	M	D	G	D	I	S	V	D	S	E	.	P	G	M	G	S	Q	F	T	V	R	I	P	.	.	L	Y	G	A	Q	Y	P	Q	K	K	G	V	E	G	L	S	G	K	R	C	W	L	A	V	R	N	A
Query Conservation																														.													.	.
Alig confidence															.	.	.	.												.													.	.
Template Conservation															.	.	.	.
Template Sequence		T	G	G	R	N	G	Y	G	A	K	L	C	N	.	.	.	.	I	F	S	T	K	F	T	V	E	T	A	S	R	E	Y	K	K	M	F	K	Q	T	W	M	D	N	M	G	R	A	G	E	M	E	L	K	P	F	N	G	E	D	Y	T	C	I	T	F	Q	P	D	L	S
Template Known Secondary structure			S			S	S								.	.	.	.		T											G	G	G	T									T	T	T	T												S	S											G	G
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions