 |
Job Description | P14376 | Confidence | 64.27% | Date | Thu Jan 5 11:34:01 GMT 2012 |
Rank | 375 | Aligned Residues | 92 |
% Identity | 16% | Template | c1yadD_ |
PDB info |
PDB header:transcription | Chain: D: PDB Molecule:regulatory protein teni; |
PDBTitle: structure of teni from bacillus subtilis
|
Resolution | 2.10 Å |
|
 |
  |   |
848 | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | |
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
G | Y | Q | C | K | T | A | N | D | G | V | D | A | L | N | V | L | S | K | N | H | I | D | I | V | L | S | D | V | N | M | P | N | M | D | G | Y | R | L | T | Q | R | I | R | Q | L | G | L | T | L | P | V | I | G | V | T | A | N | A | L | A | E | E | K | Q | R | C | L | E | S | G | M | D | S | C | L | S | . |
. |
. |
Query Conservation |   |
|   |   |
|   |   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|   |
| . | . | . |   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |
|
|   |
|
|
|
| . |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|   |
Template Sequence |   |
H | L | H | I | G | R | S | V | H | S | L | E | E | A | V | Q | A | E | K | E | D | A | D | Y | V | L | F | . |
. |
. |
G | H | V | F | R | G | V | S | L | L | S | D | I | K | Q | R | I | . |
S | I | P | V | I | A | I | G | G | . |
M | T | P | D | R | L | R | D | V | K | Q | A | G | A | D | G | I | A | V | M | S | G |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
| S |
|  |  |  |  | S | S | . |
|
| G | G | G |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
. | . | 140 | . | . | . | . | . | . | |
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
925 | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . |
Predicted Secondary structure |   |
. | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
K | P | V | T | L | D | V | I | K | Q | T | L | T | L | Y | A | E | R | V | R |
Query Conservation |   |
. | . |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
I | F | S | S | A | E | P | L | E | A | A | R | R | Y | S | R | K | L | K | E | M | R |
Template Known Secondary structure |   |
 |  | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|