Return to main results Retrieve Phyre Job Id

Job DescriptionP14376
Confidence95.17%DateThu Jan 5 11:34:01 GMT 2012
Rank258Aligned Residues113
% Identity20%Templatec1y80A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   822.......830 .........840.........850.. .......860.........870.........880. ........890..
Predicted Secondary structure 



....





...












..
Query SS confidence 








. . . .





















. . .




























. .










Query Sequence  NDDMMILVV. . . . DDHPINRRLLADQLGSLGYQCK. . . TANDGVDALNVLSKNHIDIVLSDVNMPNM. . DGYRLTQRIRQ
Query Conservation       



....

   
   
   
   
  
 ... 
 

 


        






 

 
..

 
 

 

 
Alig confidence 








....





















...




























..










Template Conservation 
  
 

     

 
 

   
   
   
  

 

   
   
         
 
 

             
  

 
Template Sequence  PSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIA
Template Known Secondary structure 



BTT



TT


SSB


S

SGGGT
Template Predicted Secondary structure 

























Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   893. .....900.........910.........920.........930......
Predicted Secondary structure 
.















Query SS confidence 

.









































Query Sequence  LG. LTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTL
Query Conservation    .   



 

            



  
 


    
   
Alig confidence 

.












..


























Template Conservation        
 




   ..        


    
   

     
Template Sequence  AGLRDRVKVIVGGAPL. . SQDFADEIGADGYAPDAASATELCRQL
Template Known Secondary structure  TT
GGG
STT
..
T
S
SS
Template Predicted Secondary structure 










..






Template SS confidence 












































   166...170.........180. ........190.........200........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions