Job Description P14376 Confidence 96.89% Date Thu Jan 5 11:34:01 GMT 2012 Rank 239 Aligned Residues 118 % Identity 18% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

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		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.					.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.													.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	Q	V	I	S	N	L	L	S	N	A	I	K	F	T	.	.	.	.	D	T	G	C	I	V	L	H	V	R	A	D	G	D	Y	L	S	I	R	V	R	D	T	G	V	G	I	P	A	K	.	.	.	.	.	.	.	.	.	.	.	.	E	V	V	R	L	F	D	P	F	F	Q	V	G	T	G	V	Q	R
Query Conservation																		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.
Template Sequence		L	F	K	I	F	D	E	I	L	V	N	A	A	D	N	K	V	R	D	P	S	M	K	R	I	D	V	N	I	H	A	E	E	H	T	.	.	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T	S	S	N	Y	D	D	D	E	K	K	V
Template Known Secondary structure																					T	T										T	T	T	T		.	.							S	S					S	B		T	T	T		S	B								S	S	S			S				T	T	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	Q	G	T	G	L	G	L	A	I	C	E	K	L	I	S	M	M	D	G	D	I	S	V	D	S	E	P	G	M	G	S	Q	F	T	V	R	I	P	L	Y	G	A	Q	Y	P	Q	K	K	G	V	E	G	L	S	G	K	R
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F	S	T	E	F	I	L	E	T	A	D	.	.	.	L	N	V	G	Q	K	Y	V	Q	K	W	E	N	N	M	S	I	C	H	P	P	K	I	T	S	Y	K	K	G	P	S
Template Known Secondary structure			S			S	S									T											.	.	.	T	T	T	T									T	T	T	T												S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions