Job Description P14376 Confidence 46.30% Date Thu Jan 5 11:34:01 GMT 2012 Rank 449 Aligned Residues 80 % Identity 9% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		837	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.								.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.			.	.	880	.	.	.	.	.	.	.	.	.	890	.	.					.	.	.	.	.	.	.	900	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.																					.	.																.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.																					.	.																.	.	.	.
Query Sequence		R	R	L	L	A	D	Q	L	G	S	L	G	Y	Q	C	K	T	A	N	D	G	.	.	.	.	.	.	.	V	D	A	L	N	V	L	S	K	N	H	I	D	I	V	L	S	D	V	N	.	.	M	P	N	M	D	G	Y	R	L	T	Q	R	I	R	Q	.	.	.	.	L	G	L	T	L	P	V	I	G	V	T
Query Conservation																							.	.	.	.	.	.	.																					.	.																.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																					.	.																.	.	.	.
Template Conservation
Template Sequence		L	E	Q	L	Q	Q	L	G	Q	Q	I	G	V	P	V	Y	G	E	P	G	E	K	D	V	V	G	I	A	K	R	G	V	E	K	F	L	S	E	K	M	E	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	A	A	L	L	E	E	M	K	N	I	Y	E	A	I	K	P	D	E	V	T	L	V	I	D
Template Known Secondary structure													T							T	T																		T	T		S									S			T	T																			S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		904	.	.	.	.	.	910	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	A	L	A	E	E	K	Q	R	C	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	I	G	Q	K	A	Y	D	L	A	S	K
Template Known Secondary structure		G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions