Job Description P76002 Confidence 21.48% Date Thu Jan 5 12:17:13 GMT 2012 Rank 92 Aligned Residues 83 % Identity 18% Template d1vpsa_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP Resolution 1.90

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		S	G	E	I	K	G	Y	D	Y	D	T	Y	T	F	Y	A	K	K	G	Q	K	V	H	V	S	I	S	N	E	G	A	D	T	Y	L	F	G	P	.	.	.	.	.	.	G	I	D	D	S	V	D	L	S	R	Y	S	P	E	L	D	S	H	G	Q	Y	S	L	P	A	S	G	K	Y	E	L	R	V	L	Q	T
Query Conservation																																								.	.	.	.	.	.
Alig confidence																																				.				.	.	.	.	.	.																																				.
Template Conservation																																				.																																													.
Template Sequence		K	G	I	S	T	P	V	E	G	S	Q	Y	H	V	F	A	V	G	G	E	P	L	D	L	Q	G	L	V	T	D	A	R	T	K	.	Y	K	E	E	G	V	V	T	I	K	T	I	T	K	K	D	M	V	N	K	D	Q	V	L	N	P	I	S	K	A	K	L	D	K	D	G	M	Y	P	V	E	I	W	H	.
Template Known Secondary structure									B	S										S	S									S		T	T			.			S	S	S	S								S	S				G	G	G	G	S			T	T							S	T	T		S	B	T	T	T			.
Template Predicted Secondary structure																																				.																																													.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	D	A	R	K	N	K	T	K	K	Y
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	P	D	P	A	K	N	E	N	T	R	Y
Template Known Secondary structure		.			T	T	S		T	T
Template Predicted Secondary structure		.
Template SS confidence
			229	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions