Job Description P0AG11 Confidence 99.68% Date Thu Jan 5 11:27:47 GMT 2012 Rank 7 Aligned Residues 125 % Identity 32% Template c3bdnB_ PDB info PDB header:transcription/dna Chain: B: PDB Molecule:lambda repressor; PDBTitle: crystal structure of the lambda repressor Resolution 3.91 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																												.	.	.	.	.
Query SS confidence																																.	.																												.	.	.	.	.
Query Sequence		P	A	D	L	R	E	I	V	T	F	P	L	F	S	D	L	V	Q	C	G	F	P	S	P	A	A	D	Y	V	E	.	.	Q	R	I	D	L	N	Q	L	L	I	Q	H	P	S	A	T	Y	F	V	K	A	S	G	D	S	M	I	.	.	.	.	.	D	G	G	I	S	D	G	D	L	L	I	V	D	S	A	I
Query Conservation																																.	.																												.	.	.	.	.
Alig confidence																.																.	.																												.	.	.	.	.
Template Conservation																.
Template Sequence		Q	P	S	L	R	S	E	Y	E	Y	P	V	F	S	.	H	V	Q	A	G	M	F	S	P	E	L	R	T	F	T	K	G	D	A	E	R	W	V	S	T	T	K	K	A	S	D	S	A	F	W	L	E	V	E	G	N	S	M	T	A	P	T	G	S	K	P	S	F	P	D	G	M	L	I	L	V	D	P	E	Q
Template Known Secondary structure							S								S	.	S	S			S		S	S	S				T	T		S									S	S					T	T								S		S	S			S	S	S	S	S					T	T							S	S
Template Predicted Secondary structure																.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																	.												.
Query SS confidence																	.												.
Query Sequence		T	A	S	H	G	D	I	V	I	A	A	V	D	G	E	.	F	T	V	K	K	L	Q	L	R	P	T	.	V	Q	L	I	P	M	N	S	A	Y	S	P	I	T	I	S	S	E	D	T	L	D	V	F	G	V	V	I	H	V	V
Query Conservation																	.												.
Alig confidence																	.												.														.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		A	V	E	P	G	D	F	C	I	A	R	L	G	G	D	E	F	T	F	K	K	L	I	R	G	S	G	Q	V	F	L	Q	P	L	N	P	Q	Y	P	M	I	.	.	.	.	P	E	S	C	S	V	V	G	K	V	I	A	S	Q
Template Known Secondary structure					T	T								T	T	T										S	S	S	S						S		S	S	S			B	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions