Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG11
Confidence98.72%DateThu Jan 5 11:27:47 GMT 2012
Rank9Aligned Residues66
% Identity18%Templatec2fkdK_
PDB info PDB header:transcription regulatorChain: K: PDB Molecule:repressor protein ci; PDBTitle: crystal structure of the c-terminal domain of bacteriophage2 186 repressor
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80.........90.........100. ........110.........120.........130........
Predicted Secondary structure 














..
















Query SS confidence 

































. .




































Query Sequence  DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL. . RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM
Query Conservation   

 



         


        


   ..     
 
 
  
    
       


 

  

  
Alig confidence 















.
















..













....


















Template Conservation       


    
 

. 


 


 
 









 


 
 
  

....    

 





    
 
Template Sequence  EGKIYFVDKQASLSDG. LWLVDIEGAISIRELTKLPGRKLHVAGGKVPFE. . . . CGIDDIKTLGRVVGVYSEV
Template Known Secondary structure  TTTT



S.TTTTTSSSS
....GGGSS
Template Predicted Secondary structure 










.









....
Template SS confidence 








































































   124.....130......... 140.........150.........160.........170.. .......180.........190.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions