Return to main results Retrieve Phyre Job Id

Job DescriptionP31069
Confidence99.83%DateWed Jan 25 15:20:48 GMT 2012
Rank11Aligned Residues134
% Identity12%Templated2hmva1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Potassium channel NAD-binding domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   244.....250.........260.........270.........280.........290.........300.........310.........320...
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDA
Query Conservation   



 
       
   
       


                     
 

      
  
 
  
  

     
 
Alig confidence 

































....









































Template Conservation 
 


 
 
  
  

  
   
  




    ....              

      
    
  
  

     
 
Template Sequence  KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEE. . . . KVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI
Template Known Secondary structure 



STT


S
....TTTT
S

TT
TTTGGG
S


S
Template Predicted Secondary structure 









....















Template SS confidence 















































































   7..10.........20.........30.........40 .........50.........60.........70.........80..
 
   324.....330.........340.........350.........360.........370.........380.
Predicted Secondary structure 














Query SS confidence 

























































Query Sequence  DNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEE
Query Conservation   
    
          


          
   
 
 

 
       
        
Alig confidence 

























































Template Conservation                   


          
   
 
 

 
    
  

  
    
Template Sequence  QASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDEN
Template Known Secondary structure  TT
S

ST
S

Template Predicted Secondary structure 














Template SS confidence 

























































   83......90.........100.........110.........120.........130.........140
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions