 |
Job Description | P31069 | Confidence | 95.51% | Date | Wed Jan 25 15:20:48 GMT 2012 |
Rank | 125 | Aligned Residues | 82 |
% Identity | 15% | Template | d1p3da1 |
SCOP info | MurCD N-terminal domain
| MurCD N-terminal domain
| MurCD N-terminal domain
|
Resolution | 1.70 |
|
 |
  |   |
244 | . | . | . | . | . | 250 | . | . | . | . | . | . | |
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | H | F | I | V | C | G | H | S | I | L | A | I | . |
N | T | I | L | Q | L | N | Q | R | G | Q | N | V | T | V | I | S | N | L | P | E | D | D | I | K | Q | L | E | Q | R | L | G | D | N | A | D | V | I | P | G | D | S | N | D | S | S | V | L | K | K | A | G | I | D | R | C | R | A | I | L | A | L | S | D | N | D |
Query Conservation |   |
  |
|
|
|
|   |
|   |   |   |   |   |   | . |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|
|
|   |
|
|   |
|
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |   |
|   |
|
|   |
|
|
|
|   |
Template Sequence |   |
Q | Q | I | H | F | I | G | I | G | G | A | G | X | S | G | I | A | E | I | L | L | N | E | G | Y | Q | I | S | G | S | D | I | A | D | G | V | V | T | Q | R | L | A | Q | A | . |
. |
. |
G | A | K | I | Y | I | G | H | A | E | E | H | . |
. |
. |
. |
. |
. |
. |
I | E | G | A | S | V | V | V | V | S | S | A | I | K |
Template Known Secondary structure |   |
|  |  |  |  |  | T | T | T | S | T | T |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | S |
|
| S |  |  |  |  |  |  |  |  | T | . | . | . | T |
|  |  |  |  | S |
|
| G | G | G | . | . | . | . | . | . | . | G | T | T |
| S |  |  |  |  |
| T | T | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
323 | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | N | A | F | V | V | L | S | A | K | D | M | S |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
| . |   |   |
|   |   |   |
|
Template Sequence |   |
D | D | N | P | E | L | . |
V | T | S | K | Q | K | R |
Template Known Secondary structure |   |
T | T |
|  |  |  | . |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  | . |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | |
. | . | . | . | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|