Job Description P31069 Confidence 99.72% Date Wed Jan 25 15:20:48 GMT 2012 Rank 15 Aligned Residues 170 % Identity 18% Template c3nafA_ PDB info PDB header:ion transport Chain: A: PDB Molecule:calcium-activated potassium channel subunit alpha-1; PDBTitle: structure of the intracellular gating ring from the human high-2 conductance ca2+ gated k+ channel (bk channel) Resolution 3.10 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																				.	.												.	.	.	.	.														.
Query SS confidence																				.	.												.	.	.	.	.														.
Query Sequence		K	G	N	N	H	T	M	H	R	K	D	H	F	I	V	C	G	H	.	.	S	I	L	A	I	N	T	I	L	Q	L	.	.	.	.	.	N	Q	R	G	Q	N	V	T	V	I	S	N	L	.	P	E	D	D	I	K	Q	L	E	Q	R	L	G	D	N	A	D	V	I	P	G	D	S	N	D	S	S	V	L	K
Query Conservation																				.	.												.	.	.	.	.														.
Alig confidence																				.	.												.	.	.	.	.														.
Template Conservation
Template Sequence		G	G	S	Y	S	A	V	S	G	R	K	H	I	V	V	C	G	H	I	T	L	E	S	V	S	N	F	L	K	D	F	L	H	K	D	R	D	D	V	N	V	E	I	V	F	L	H	N	I	S	P	N	L	E	L	E	A	L	F	K	R	H	F	T	Q	V	E	F	Y	Q	G	S	V	L	N	P	H	D	L	A
Template Known Secondary structure			S	S						S	S							S															T		T	T	S												S	S													T	T	T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.									.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.							.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query Sequence		K	A	G	I	D	R	C	R	A	I	L	A	L	S	D	N	.	.	.	.	.	.	.	.	D	A	D	N	A	F	V	V	L	S	A	K	D	M	S	S	D	V	K	T	V	L	A	V	S	D	S	K	N	L	N	K	I	K	M	V	H	.	.	.	.	.	.	P	D	I	I	L	S	P	Q	L	F	G	S	E
Query Conservation																		.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	K	I	E	S	A	D	A	C	L	I	L	A	N	K	Y	C	A	D	P	D	A	E	D	A	S	N	I	M	R	V	I	S	I	K	N	Y	H	P	K	I	R	I	I	T	Q	M	L	Q	Y	H	N	K	A	H	L	L	N	I	P	S	W	N	W	K	E	G	D	D	A	I	C	L	A	E	L	K	L	G
Template Known Secondary structure			T	T	G	G	G		S								T	T		S																				S	T	T								S		T	T	G	G	G	S	G	G	G		T	T			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	A	R	V	L	N	G	E	E	I	N	N	D	M	L	V	S	M	L	L	N	S	G	H	G	I	F	S	D	N	D	E	L
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		F	I	A	Q	S	C	L	A	Q	G	L	S	T	.	.	M	L	A	N	L	F	S	M	R	S	F	I	K	I	E	E	D	T	W
Template Known Secondary structure									S	T	T				.	.							S									S		S
Template Predicted Secondary structure															.	.
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.			.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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