Job Description P31069 Confidence 90.08% Date Wed Jan 25 15:20:48 GMT 2012 Rank 394 Aligned Residues 99 % Identity 7% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																								.	.																																																							.	.
Query SS confidence																								.	.																																																							.	.
Query Sequence		F	I	V	C	G	H	S	I	L	A	I	N	T	I	L	Q	L	N	Q	R	G	Q	.	.	N	V	T	V	I	S	N	L	P	E	D	D	I	K	Q	L	E	Q	R	L	G	D	N	A	D	V	I	P	G	D	S	N	D	S	S	V	L	K	K	A	G	I	D	R	C	R	A	I	L	A	L	S	D	N	.	.
Query Conservation																								.	.																																																							.	.
Alig confidence																								.	.																											.	.																											.	.
Template Conservation																																																				.	.
Template Sequence		I	T	V	V	G	V	G	D	V	G	M	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	L	V	D	A	D	T	D	K	L	R	G	E	A	L	D	L	Q	H	G	S	L	F	L	.	.	S	T	P	K	I	V	F	G	K	D	Y	N	V	S	A	N	S	K	L	V	I	I	T	A	G	A	R	M
Template Known Secondary structure								S												T	T	T	S		S							S															T	T	T	T		.	.	S								S	S	G	G	G	G	T	T									S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
											322	.	.	.	.	.	.	.	330	.					.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	D	A	D	N	A	F	V	V	L	S	.	.	.	.	A	K	D	M	S	S	D	V	K	T	V	L	A	V	S
Query Conservation		.	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation
Template Sequence		V	S	G	Q	T	R	L	D	L	L	Q	R	N	V	A	I	M	K	A	I	V	P	G	V	I	Q	N	S	P	D	C	K	I	I	V	V	T	N
Template Known Secondary structure			T	T	T		S	S		T	T											T	T	T					S	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions