Job Description P31069 Confidence 90.19% Date Wed Jan 25 15:20:48 GMT 2012 Rank 388 Aligned Residues 107 % Identity 10% Template c1pzfD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:lactate dehydrogenase; PDBTitle: t.gondii ldh1 ternary complex with apad+ and oxalate Resolution 2.20 Å

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																														.																						.	.	.	.	.
Query SS confidence																														.																						.	.	.	.	.
Query Sequence		T	M	H	R	K	D	H	F	I	V	C	G	H	S	I	L	A	I	N	T	I	L	Q	L	N	Q	R	G	.	Q	N	V	T	V	I	S	N	L	P	E	D	D	I	K	Q	L	E	Q	R	L	.	.	.	.	.	G	D	N	A	D	V	I	P	G	D	S	N	D	S	S	V	L	K	K	A	G	I	D	R	C
Query Conservation																														.																						.	.	.	.	.
Alig confidence																														.																						.	.	.	.	.																		.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		L	V	Q	R	R	K	K	V	A	M	I	G	S	G	M	I	G	G	T	M	G	Y	L	C	A	L	R	E	L	A	D	V	V	L	Y	D	V	V	K	G	M	P	E	G	K	A	L	D	L	S	H	V	T	S	V	V	D	T	N	V	S	V	R	A	E	Y	S	Y	E	A	A	L	.	.	.	.	.	T	G	A
Template Known Secondary structure				S									S		S														T									S	S	S	S																T	T										S						.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.						.	.	90
		313	.	.	.	.	.	.	320	.	.																	.	.	.	.	.	.	.	330	.					.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Query Sequence		R	A	I	L	A	L	S	D	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	N	A	F	V	V	L	S	.	.	.	.	A	K	D	M	S	S	D	V	K	T	V	L	A	V	S	D	S	K	N	L
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.								.
Template Conservation																																																.
Template Sequence		D	C	V	I	V	T	A	G	L	T	K	V	P	G	K	P	D	S	E	W	S	R	N	D	L	L	P	F	N	S	K	I	I	R	E	I	G	Q	N	I	K	K	Y	C	P	K	.	T	F	I	I	V	V	T	N	P	L	D	C
Template Known Secondary structure		S							S		S	S		T	T			G	G	G			S	G	G	G																				T	T	.	S							S	S
Template Predicted Secondary structure																																																.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions