Job Description P31069 Confidence 99.96% Date Wed Jan 25 15:20:48 GMT 2012 Rank 1 Aligned Residues 185 % Identity 25% Template c1lnqC_ PDB info PDB header:metal transport Chain: C: PDB Molecule:potassium channel related protein; PDBTitle: crystal structure of mthk at 3.3 a Resolution 3.30 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	M	T	A	F	Y	F	S	I	E	T	M	S	T	V	G	Y	G	D	I	V	P	V	S	E	S	A	R	L	F	T	I	S	V	I	I	S	G	I	T	V	F	A	T	S	M	T	S	I	F	G	P	L	I	R	G	G	F	N	K	L	V	K	G	N	N	H	T	M	H	R	K	D	H	F	I	V	C	G
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	W	T	V	S	L	Y	W	T	F	V	T	I	A	T	V	G	Y	G	D	Y	S	P	S	T	P	L	G	M	Y	F	T	V	T	L	I	V	L	G	I	G	T	F	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	E	R	L	L	E	F	L	R	H	V	V	I	C	G
Template Known Secondary structure			S	S	S	S									T	T				S	S						S	S						T					T	T	S	T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	T	T	T								S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.																				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	I	L	A	I	N	T	I	L	Q	L	N	Q	R	G	Q	N	V	T	V	I	S	N	L	P	E	D	D	I	K	Q	L	E	Q	R	L	G	D	N	A	D	V	I	P	G	D	S	N	D	S	S	V	L	K	K	A	G	I	D	R	C	R	A	I	L	A	L	S	D	N	D	A	D	N	A	F	V	V	L
Query Conservation
Alig confidence														.	.														.	.	.	.
Template Conservation														.	.														.	.	.	.
Template Sequence		W	S	E	S	T	L	E	C	L	R	E	L	.	.	R	G	S	E	V	F	V	L	A	E	D	E	N	.	.	.	.	V	R	K	K	V	L	R	S	G	A	N	F	V	H	G	D	P	T	R	V	S	D	L	E	K	A	N	V	R	G	A	R	A	V	I	V	D	L	E	S	D	S	E	T	I	H	C	I	L
Template Known Secondary structure											T	T	G	.	.	G	G	S							S		G	G	.	.	.	.	G							T	T						S		T	T	S							T		S	T	T									S	S
Template Predicted Secondary structure														.	.														.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	K	D	M	S	S	D	V	K	T	V	L	A	V	S	D	S	K	N	L	N	K	I	K	M	V	H	P	D	I	I	L	S	P	Q	L	F	G	S	E	I	L	A	R	V	L	N	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	R	K	I	D	E	S	V	R	I	I	A	E	A	E	R	Y	E	N	I	E	Q	L	R	M	A	G	A	D	Q	V	I	S	P	F	V	I	S	G	R	L	M	S	R	S	I	D	D	G
Template Known Secondary structure					T	T		T	T	S							S	S	G	G	G							T	T		S																T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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