Job Description P31125 Confidence 1.44% Date Thu Jan 5 11:47:10 GMT 2012 Rank 46 Aligned Residues 81 % Identity 11% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.							.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		L	M	Y	L	A	F	V	A	T	I	V	G	Y	G	I	W	G	T	L	L	G	R	Y	E	T	W	R	V	A	P	L	S	L	L	V	P	V	V	G	L	A	S	A	A	L	L	L	D	E	R	L	T	G	L	Q	F	L	G	A	V	L	I	M	T	G	.	.	.	.	.	.	L	Y	I	N	V	F	G	L	R
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	V
Template Known Secondary structure																			T	T				T	T	T	T	T																			T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	K	A	V	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	E	E	G	L	P
Template Known Secondary structure					T	S
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions