Job Description P31125 Confidence 24.35% Date Thu Jan 5 11:47:10 GMT 2012 Rank 3 Aligned Residues 208 % Identity 5% Template c1xioA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:anabaena sensory rhodopsin; PDBTitle: anabaena sensory rhodopsin Resolution 2.00 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	L	A	G	L	R	F	M	L	V	A	F	P	A	I	F	F	V	A	R	P	K	V	P	L	N	L	L	L	G	Y	G	L	T	I	S	F	A	Q	F	A	F	L	F	C	A	I	N	F	G	M	P	A	G	L	A	S	L	V	L	Q	A	Q	A	F	F	T	I	M	L	G	A	F	T	F	G	E	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	W	I	Y	V	A	G	M	T	I	G	A	L	H	F	W	S	L	S	R	N	P	R	G	V	P	Q	Y	E	Y	L	V	A	M	F	I	P	I	W	S	G	L	A	Y	M	A	M	A	I	D	I	A	H	Y	A	R	Y	I	D	W	M	V	T	T	P	L	L	L	L	S	L	S	W	T	A	M	Q	F	I	K
Template Known Secondary structure																					T	S		T	T																												T	T																							T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		H	G	K	Q	L	A	G	I	A	L	A	I	F	G	V	L	V	L	I	E	D	S	L	N	G	Q	H	V	A	M	.	L	G	F	M	L	T	L	A	A	A	F	S	W	A	C	G	N	I	F	N	K	K	I	M	S	H	S	T	R	P	A	V	M	S	L	V	I	W	S	A	L	I	P	I	I	P	F	F	V
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		K	D	W	T	L	I	G	F	L	M	S	T	Q	I	V	V	I	T	S	G	L	I	A	D	L	S	E	R	D	W	V	R	Y	L	W	Y	I	C	G	V	C	A	F	L	I	I	L	W	G	I	W	N	P	L	R	A	K	T	R	T	Q	S	S	E	L	A	N	L	Y	D	K	L	V	T	Y	F	T	V	L	W
Template Known Secondary structure																												S	S																								T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	I	L	D	G	S	A	T	M	I	H	S	L	V	T	I	D	M	T	T	I	L	S	L	M	Y	L	A	F	V	A	T	I	V	G	Y	G	I	W	G	T	L	L	G	R	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	Y	P	I	V	W	I	I	G	P	S	G	F	G	W	I	N	Q	T	I	D	T	F	L	F	C	L	L	P	F	F	S	K	V	G	F	S	F	L	D	L	H	G	L	R	N	L	N
Template Known Secondary structure											S	T	T	T	T		S	S																															T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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