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24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
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. | . | . | . | . | . | . | . | 50 | . | . | . | |
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. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
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|  |  |  |  |  |  |
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| . | . |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |
Query SS confidence |   |
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| . |
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| . |
. |
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Query Sequence |   |
G | A | E | S | A | L | V | D | E | L | S | S | R | L | G | R | A | L | . |
. |
G | M | D | S | V | E | S | S | I | S | S | N | . |
. |
A | I | V | L | T | T | I | K | D | G | Q | C | L | T | S | T | R | K | N | H | D | R | G | I | N | M | H | V | V | T | E | V | Q | H | I | V | I | L | A | E | H | H | L | L | D | Y |
Query Conservation |   |
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|   |   |   |   |
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|   |   |   | . | . |
|   |   |   |   |   |   |   |
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|   |
| . | . |   |
|   |
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|   |   |   |   |   |   |   |   |
|   |   |   |   |
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|   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
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| . | . |
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| . | . |
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| . | . | . | . | . | . |
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Template Conservation |   |
|   |   |   |   |   |
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|   |   |
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|   |   |
|   |   |   |
|   |   |   |
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|   |
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|   |
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|   |   |
|   |   |
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|   |   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
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|   |   |
|   | . | . | . | . | . | . |   |   |   |   |
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Template Sequence |   |
G | Y | S | A | K | Y | L | E | N | T | L | E | A | F | M | K | A | I | E | A | G | A | N | G | V | E | L | D | V | R | L | S | K | D | G | K | V | V | V | S | H | D | E | D | L | K | R | L | F | G | L | D | V | K | I | R | D | A | T | V | S | E | L | K | E | L | T | . |
. |
. |
. |
. |
. |
D | G | K | I | T | T | L |
Template Known Secondary structure |   |
T | T | T | T | T | S |
| T | T | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |
| S | S | S |  |  |  |  |  |  |
|  |  |  |  | G | G | G | S |
|  |  |  |  |  |  |  | T | . | . | . | . | . | . | T | T |
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| B |  |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |
| . | . | . | . | . | . |
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|  |
Template SS confidence |   |
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  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
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. | . | . | . | . | 80 | . |
  |
  |   |
100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | V | E | K | R | F | S | Q |
Query Conservation |   |
  |
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |
Template Sequence |   |
K | E | V | F | E | N | V | S | D |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
Template SS confidence |   |
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  |   |
82 | . | . | . | . | . | . | . | 90 |
  |