Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFP9
Confidence13.05%DateThu Jan 5 11:26:56 GMT 2012
Rank57Aligned Residues53
% Identity13%Templatec3cu5B_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:two component transcriptional regulator, arac family; PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.. .......80.........90.........100
Predicted Secondary structure 








.







Query SS confidence 

























.



























Query Sequence  NATIAIYDEDNGEHSVELTQRFARAS. AFTHVLLLKSPQEIRPTIDTQKALLLVR
Query Conservation     
 

  
       
   
    .                 
        
 
Alig confidence 







.
















.



























Template Conservation   






.
       
   
         
  
     

        




Template Sequence  SLRILIVD. DEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHPPNVLLT
Template Known Secondary structure 

.S
TS
TTTS
SSS

S
Template Predicted Secondary structure 


.











Template SS confidence 






















































   2....... 10.........20.........30.........40.........50.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions