Job Description P0AFP9 Confidence 26.48% Date Thu Jan 5 11:26:56 GMT 2012 Rank 32 Aligned Residues 51 % Identity 14% Template c1kgsA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima Resolution 1.50 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	T	I	A	I	Y	D	E	D	N	G	E	H	S	V	E	L	T	Q	R	F	A	R	A	S	A	F	T	H	V	L	L	L	K	S	P	Q	E	I	R	P	T	I	D	T	Q	K	A	L	L	L	V	R
Query Conservation
Alig confidence										.																			.	.
Template Conservation										.																			.	.
Template Sequence		N	V	R	V	L	V	V	E	.	D	E	R	D	L	A	D	L	I	T	E	A	L	K	K	E	X	F	.	.	T	V	D	V	C	Y	D	G	E	E	G	X	Y	X	A	L	N	E	P	F	D	V	V	I	L
Template Known Secondary structure										.	S	S														T	T		.	.						S	S											S			S
Template Predicted Secondary structure										.																			.	.
Template SS confidence
		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions