Return to main results Retrieve Phyre Job Id

Job DescriptionP69820
Confidence100.00%DateThu Jan 5 12:12:06 GMT 2012
Rank6Aligned Residues147
% Identity18%Templatec3urrB_
PDB info PDB header:transferaseChain: B: PDB Molecule:pts iia-like nitrogen-regulatory protein ptsn; PDBTitle: structure of pts iia-like nitrogen-regulatory protein ptsn (bth_i0484)2 (ptsn)
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  MKLRDSLAENKSIRLQAEAETWQEAVKIGVDLLVAADVVEPRYYQAILDGVEQFGPYFVIAPGLAMPHGRPEEGVKKTGF
Query Conservation 
 
   

  
 
       
 

 
      
     
     
 

 

    
   

  




      
    
Alig confidence 






























.























..













.






Template Conservation 
  
   
    
         
  
     .
             
  

    
.. 
   




    . 
    
Template Sequence  MNRLAKILPLENVVIGLSVTSKKRVFEQAGL. IFENQIARSTVTDNLFARERLGST. . GLGEGVAIPHGRIK. GLKHPLA
Template Known Secondary structure 

T

GGG

S
.TT


TTS

..TT

T.T

S
Template Predicted Secondary structure 







.







..






.




Template SS confidence 















































































   1........10.........20.........30. ........40.........50..... ....60......... 70......
 
   81........90.........100.........110. ........120.........130.........140.........150.
Predicted Secondary structure 












.




Query SS confidence 






























.







































Query Sequence  SLVTLKKPLEFNHDDNDPVDILITMAAVDAN. THQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRTN
Query Conservation   
  
  

         
  
 

      .      
  
   
        
  
    
    
    
Alig confidence 






























.







































Template Conservation   
  
  

     
   
  
  
          
  
  
   
        
            
 


Template Sequence  AFVRLAEPIPFEAPDGQPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQWQ
Template Known Secondary structure 



TT


SS







Template Predicted Secondary structure 




















Template SS confidence 







































































   7980.........90.........100.........110.........120.........130.........140.........150
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions