Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMS7
Confidence7.70%DateThu Jan 5 12:38:03 GMT 2012
Rank26Aligned Residues32
% Identity22%Templatec3iz5k_
PDB info PDB header:ribosomeChain: K: PDB Molecule:60s ribosomal protein l13a (l13p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution5.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20... ......30......
Predicted Secondary structure 




...
Query SS confidence 


















. . .












Query Sequence  VNHIMRTINEMSSYTPHMK. . . VNRIAERLSKVQK
Query Conservation 

 


 

 

   
  
... 
  
 
   

 
Alig confidence 


















...












Template Conservation 

 




 
 





 




  









Template Sequence  VRNLIREVAGFAPYEKRITELLKVGKDKRALKVAK
Template Known Secondary structure  STT

SS
Template Predicted Secondary structure 





Template SS confidence 


































   43......50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions