 |
| Job Description | Q9JMS7 | | Confidence | 3.61% | Date | Thu Jan 5 12:38:03 GMT 2012 |
| Rank | 68 | Aligned Residues | 16 |
| % Identity | 25% | Template | c3ik5A_ |
| PDB info |
PDB header:viral protein/signaling protein | Chain: A: PDB Molecule:protein nef; |
PDBTitle: sivmac239 nef in complex with tcr zeta itam 1 polypeptide2 (a63-r80)
|
| Resolution | 2.05 Å |
|
| | |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|  | | |  |
|
|
|
|
|  | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
G | S | I | D | G | I | F | V | G | E | T | G | D | K | I | I |
| Query Conservation | |
| | |
|
| |
| | | |
| | | | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
| |
|
| |
|
| | |
|
|
| Template Sequence | |
G | G | L | E | G | I | Y | Y | S | A | R | R | H | R | I | L |
| Template Known Secondary structure | |
T |
| S | T | T |
| B |
|
| | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
| | |
| | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
